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Question Some file names are corrupted in geant4.10.02.p01 

Forum: Installation and Configuration
Date: 10 Mar, 2016
From: Maura E.M. <Maura E.M.>

I checked thechecksum of the .tr.gz file using the right option and got a match. ~ mauede$ openssl sha256 geant4.10.02.p01.tar.gz SHA256(geant4.10.02.p01.tar.gz)= b81f7082a15f6a34b720b6f15c6289cfe4ddbbbdcef0dc52719f71fac95f7f1c

I deleted every file/directory pertinent to geant4.10.02.p01 and restarted the installation procedure. CMAKE generates the same errors I had already reported.

geant4.10.02.p01-build mauede$ cmake -DGEANT4_INSTALL_DATA=ON -DCMAKE_INSTALL_PREFIX=/Users/mauede/geant4.10.02.p01-install /Users/mauede/geant4.10.02.p01 -- The C compiler identification is AppleClang 6.0.0.6000054 -- The CXX compiler identification is AppleClang 6.0.0.6000054 -- Check for working C compiler: /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/cc -- Check for working C compiler: /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/cc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Check for working CXX compiler: /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/c++ -- Check for working CXX compiler: /Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/c++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- Found EXPAT: /opt/local/lib/libexpat.dylib (found version "2.1.0") -- Looking for sys/types.h -- Looking for sys/types.h - found -- Looking for stdint.h -- Looking for stdint.h - found -- Looking for stddef.h -- Looking for stddef.h - found -- Check size of off64_t -- Check size of off64_t - failed -- Looking for fseeko -- Looking for fseeko - found -- Looking for unistd.h -- Looking for unistd.h - found -- Configuring download of missing dataset G4NDL (4.5) -- Configuring download of missing dataset G4EMLOW (6.48) -- Configuring download of missing dataset PhotonEvaporation (3.2) -- Configuring download of missing dataset RadioactiveDecay (4.3.1) -- Configuring download of missing dataset G4NEUTRONXS (1.4) -- Configuring download of missing dataset G4PII (1.3) -- Configuring download of missing dataset RealSurface (1.0) -- Configuring download of missing dataset G4SAIDDATA (1.1) -- Configuring download of missing dataset G4ABLA (3.0) -- Configuring download of missing dataset G4ENSDFSTATE (1.2.1) -- The following Geant4 features are enabled: GEANT4_BUILD_CXXSTD: Compiling against C++ Standard '11' GEANT4_USE_SYSTEM_EXPAT: Using system EXPAT library

-- Configuring done
CMake Error at cmake/Modules/Geant4MacroLibraryTargets.cmake:109 (add_library):
  Cannot find source file:

    /Users/mauede/geant4.10.02.p01/source/physics_lists/constructors/electromagnetic/include/G4EmDNAPhysics_option1.hh

  Tried extensions .c .C .c++ .cc .cpp .cxx .m .M .mm .h .hh .h++ .hm .hpp
  .hxx .in .txx
Call Stack (most recent call first):
  cmake/Modules/Geant4MacroLibraryTargets.cmake:300 (GEANT4_LIBRARY_TARGET)
  source/physics_lists/CMakeLists.txt:22 (GEANT4_GLOBAL_LIBRARY_TARGET)

CMake Error at cmake/Modules/Geant4MacroLibraryTargets.cmake:109 (add_library):
  Cannot find source file:

    /Users/mauede/geant4.10.02.p01/source/processes/electromagnetic/dna/models/src/G4DNAEmfietzoglouExcitationModel.cc

  Tried extensions .c .C .c++ .cc .cpp .cxx .m .M .mm .h .hh .h++ .hm .hpp
  .hxx .in .txx
Call Stack (most recent call first):
  cmake/Modules/Geant4MacroLibraryTargets.cmake:300 (GEANT4_LIBRARY_TARGET)
  source/processes/CMakeLists.txt:36 (GEANT4_GLOBAL_LIBRARY_TARGET)

CMake Error: CMake can not determine linker language for target: G4physicslists
CMake Error in source/physics_lists/CMakeLists.txt:
  Exporting the target "G4physicslists" is not allowed since its linker
  language cannot be determined

CMake Error: CMake can not determine linker language for target: G4physicslists
CMake Error in source/physics_lists/CMakeLists.txt:
  Exporting the target "G4physicslists" is not allowed since its linker
  language cannot be determined

CMake Error: CMake can not determine linker language for target: G4processes
CMake Error in source/processes/CMakeLists.txt:
  Exporting the target "G4processes" is not allowed since its linker language
  cannot be determined

CMake Error: CMake can not determine linker language for target: G4processes
CMake Error in source/processes/CMakeLists.txt:
  Exporting the target "G4processes" is not allowed since its linker language
  cannot be determined

CMake Error: Cannot determine link language for target "G4physicslists".
CMake Error: Cannot determine link language for target "G4processes".
CMake Error in source/physics_lists/CMakeLists.txt:
  Exporting the target "G4physicslists" is not allowed since its linker
  language cannot be determined

CMake Error in source/physics_lists/CMakeLists.txt:
  Exporting the target "G4physicslists" is not allowed since its linker
  language cannot be determined

CMake Error in source/processes/CMakeLists.txt:
  Exporting the target "G4processes" is not allowed since its linker language
  cannot be determined

CMake Error in source/processes/CMakeLists.txt:
  Exporting the target "G4processes" is not allowed since its linker language
  cannot be determined

-- Generating done -- Build files have been written to: /Users/mauede/geant4.10.02.p01-build

I looked for the missing files and found out the files are in the right path but their names are corrupted. Namely, in directory /Users/mauede/geant4.10.02.p01/source/physics_lists/constructors/electromagnetic/include

 I have the following misnamed files:
-rw-r--r--   1 mauede  staff  2369  2 Mar 08:24 G4EmDNAPhysics_option1.hh0000644
-rw-r--r--   1 mauede  staff  2369  2 Mar 08:24 G4EmDNAPhysics_option2.hh0000644
-rw-r--r--   1 mauede  staff  2293  2 Mar 08:24 G4EmDNAPhysics_option3.hh0000644
-rw-r--r--   1 mauede  staff  2324  2 Mar 08:24 G4EmDNAPhysics_option4.hh0000644
-rw-r--r--   1 mauede  staff  2324  2 Mar 08:24 G4EmDNAPhysics_option5.hh0000644
-rw-r--r--   1 mauede  staff  2319  2 Mar 08:24 G4EmDNAPhysics_option7.hh0000644
-rw-r--r--   1 mauede  staff  2772  2 Mar 08:24 G4EmStandardPhysicsWVI.hh0000644 

In directory: /Users/mauede/geant4.10.02.p01/source/processes/electromagnetic/dna/models/src

 I have the following misnamed files:
-rw-r--r--   1 mauede  staff  11980  2 Mar 08:24 G4DNAEmfietzoglouExcitationModel.cc0000644
-rw-r--r--   1 mauede  staff  32641  2 Mar 08:24 G4DNAEmfietzoglouIonisationModel.cc0000644
-rw-r--r--   1 mauede  staff  51234  2 Mar 08:24 G4DNARuddIonisationExtendedModel.cc0000644

The above corrupted file names explain two missing files.

I have no idea what the following output message is about "-- Check size of off64_t - failed"

I do not understand the reported errors about the "linker language".

I reckon I cannot trust this configuration. Your help is very appreciated. Thank you very much Maura

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1 Question: Re: Some file names are corrupted in geant4.10.02.p01   (Gabriele Cosmo - 11 Mar, 2016)
(_ Question: Re: Some file names are corrupted in geant4.10.02.p01   (Maura E.M. - 11 Mar, 2016)
1 Question: Re: Some file names are corrupted in geant4.10.02.p01   (Gabriele Cosmo - 11 Mar, 2016)
2 Note: Re: Some file names are corrupted in geant4.10.02.p01   (Ben Morgan - 11 Mar, 2016)
1 Feedback: Re: Some file names are corrupted in geant4.10.02.p01   (Maura E.M. - 11 Mar, 2016)
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