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Question Re: errors while installing Aida 

Forum: Installation and Configuration
Re: Question errors while installing Aida (Summit)
Re: Question Re: errors while installing Aida (Ben Morgan)
Date: 12 Nov, 2010
From: Summit <Summit>

Hello,

Thanks for reply I rebuild G4. Everything is going well when I used openscientist. But when I used AIDAJNI and JAIDA then in gmake...I found a warning

/usr/bin/ld: warning: libstdc++.so.5, needed by /u/ey/perl/AIDA/AIDA2/JAIDA/AIDAJANI/AIDAJNI-3.2.3/lib/Linux-g++/libAIDAJNI.so, may conflict with libstdc++.so.6

and after that

*** glibc detected *** ../bin/Linux-g++/TestEm7: free(): invalid pointer: 0x08c77b18 *** ======= Backtrace: ========= /lib/libc.so.6(+0xa96fe1)[0x2296fe1] /usr/lib/libstdc++.so.6(_ZdlPv+0x22)[0x64d94b2] /usr/lib/libstdc++.so.6(_ZNSs4_Rep10_M_destroyERKSaIcE+0x1e)[0x64b857e] /u/ey/perl/geant4/geant4.9.3.p02/G4WORK/tmp/Linux-g++/TestEm7/libTestEm7.so(_ZN5Histo4bookEv+0x764)[0x8f6a64] /u/ey/perl/geant4/geant4.9.3.p02/G4WORK/tmp/Linux-g++/TestEm7/libTestEm7.so(_ZN9RunAction16BeginOfRunActionEPK5G4Run+0x166)[0x9001a6] /u/ey/perl/geant4/geant4.9.3.p02/lib/Linux-g++/libG4run.so(_ZN12G4RunManager17RunInitializationEv+0x2d6)[0xa6ae96] /u/ey/perl/geant4/geant4.9.3.p02/lib/Linux-g++/libG4run.so(_ZN12G4RunManager6BeamOnEiPKci+0x53)[0xa67503] /u/ey/perl/geant4/geant4.9.3.p02/lib/Linux-g++/libG4run.so(_ZN14G4RunMessenger11SetNewValueEP11G4UIcommand8G4String+0x39a)[0xa6ec0a] /u/ey/perl/geant4/geant4.9.3.p02/lib/Linux-g++/libG4intercoms.so(_ZN11G4UIcommand4DoItE8G4String+0x484)[0x444814] /u/ey/perl/geant4/geant4.9.3.p02/lib/Linux-g++/libG4intercoms.so(_ZN11G4UImanager12ApplyCommandEPKc+0x407)[0x44ec07] /u/ey/perl/geant4/geant4.9.3.p02/lib/Linux-g++/libG4intercoms.so(_ZN11G4UImanager12ApplyCommandE8G4String+0x26)[0x44ee06] /u/ey/perl/geant4/geant4.9.3.p02/lib/Linux-g++/libG4intercoms.so(_ZN9G4UIbatch11ExecCommandERK8G4String+0x3d)[0x435c7d] /u/ey/perl/geant4/geant4.9.3.p02/lib/Linux-g++/libG4intercoms.so(_ZN9G4UIbatch12SessionStartEv+0x94)[0x436b54] /u/ey/perl/geant4/geant4.9.3.p02/lib/Linux-g++/libG4intercoms.so(_ZN11G4UImanager16ExecuteMacroFileEPKc+0x4c)[0x44d03c] /u/ey/perl/geant4/geant4.9.3.p02/lib/Linux-g++/libG4intercoms.so(_ZN20G4UIcontrolMessenger11SetNewValueEP11G4UIcommand8G4String+0xec)[0x44a3ec] /u/ey/perl/geant4/geant4.9.3.p02/lib/Linux-g++/libG4intercoms.so(_ZN11G4UIcommand4DoItE8G4String+0x484)[0x444814] /u/ey/perl/geant4/geant4.9.3.p02/lib/Linux-g++/libG4intercoms.so(_ZN11G4UImanager12ApplyCommandEPKc+0x407)[0x44ec07] /u/ey/perl/geant4/geant4.9.3.p02/lib/Linux-g++/libG4intercoms.so(_ZN11G4UImanager12ApplyCommandE8G4String+0x26)[0x44ee06] ../bin/Linux-g++/TestEm7[0x804ad3f] /lib/libc.so.6(__libc_start_main+0xe6)[0x223ecc6] ../bin/Linux-g++/TestEm7[0x804a8c1] ======= Memory map: ======== 00110000-0013d000 r-xp 00000000 fd:00 698437 /u/ey/perl/geant4/geant4.9.3.p02/lib/Linux-g++/libG4error_propagation.so 0013d000-0013f000 rw-p 0002c000 fd:00 698437 /u/ey/perl/geant4/geant4.9.3.p02/lib/Linux-g++/libG4error_propagation.so 00140000-0014e000 r-xp 00000000 fd:00 698448 /u/ey/perl/geant4/geant4.9.3.p02/lib/Linux-g++/libG4Tree.so 0014e000-0014f000 rw-p 0000d000 fd:00 698448 /u/ey/perl/geant4/geant4.9.3.p02/lib/Linux-g++/libG4Tree.so 0014f000-00180000 r-xp 00000000 fd:00 698441 /u/ey/perl/geant4/geant4.9.3.p02/lib/Linux-g++/libG4interfaces.so 00180000-00181000 rw-p 00030000 fd:00 698441 /u/ey/perl/geant4/geant4.9.3.p02/lib/Linux-g++/libG4interfaces.so 00181000-00198000 r-xp 00000000 fd:00 2788852 /usr/lib/libXmu.so.6.2.0 00198000-00199000 rw-p 00017000 fd:00 2788852 /usr/lib/libXmu.so.6.2.0 00199000-001a0000 r-xp 00000000 fd:00 2766699 /usr/lib/libSM.so.6.0.0 001a0000-001a1000 rw-p 00006000 fd:00 2766699 /usr/lib/libSM.so.6.0.0 001a1000-00219000 r-xp 00000000 fd:00 698445 /u/ey/perl/geant4/geant4.9.3.p02/lib/Linux-g++/libG4visHepRep.so 00219000-0021d000 rw-p 00077000 fd:00 698445 /u/ey/perl/geant4/geant4.9.3.p02/lib/Linux-g++/libG4visHepRep.so 0021d000-002ac000 r-xp 00000000 fd:00 698443 /u/ey/perl/geant4/geant4.9.3.p02/lib/Linux-g++/libG4vis_management.so 002ac000-002ae000 rw-p 0008e000 fd:00 698443 /u/ey/perl/geant4/geant4.9.3.p02/lib/Linux-g++/libG4vis_management.so 002ae000-002af000 rw-p 00000000 00:00 0 002af000-002b1000 r-xp 00000000 fd:00 662376 /u/ey/perl/AIDA/AIDA2/JAIDA/AIDAJANI/AIDAJNI-3.2.3/lib/Linux-g++/libFHJNI.so 002b1000-002b2000 rw-p 00001000 fd:00 662376 /u/ey/perl/AIDA/AIDA2/JAIDA/AIDAJANI/AIDAJNI-3.2.3/lib/Linux-g++/libFHJNI.so 002b2000-002b4000 r-xp 00000000 fd:00 2788823 /usr/lib/libXdamage.so.1.1.0 002b4000-002b5000 rw-p 00001000 fd:00 2788823 /usr/lib/libXdamage.so.1.1.0 002b9000-002ba000 r-xp 00000000 00:00 0 [vdso] 002ba000-00356000 r-xp 00000000 fd:00 698442 /u/ey/perl/geant4/geant4.9.3.p02/lib/Linux-g++/libG4modeling.so 00356000-00359000 rw-p 0009c000 fd:00 698442 /u/ey/perl/geant4/geant4.9.3.p02/lib/Linux-g++/libG4modeling.so 00359000-0035a000 rw-p 00000000 00:00 0 0035a000-00420000 r-xp 00000000 fd:00 698439 /u/ey/perl/geant4/geant4.9.3.p02/lib/Linux-g++/libG4physicslists.so 00420000-00425000 rw-p 000c6000 fd:00 698439 /u/ey/perl/geant4/geant4.9.3.p02/lib/Linux-g++/libG4physicslists.so 00425000-0042b000 rw-p 00000000 00:00 0 0042b000-00462000 r-xp 00000000 fd:00 694723 /u/ey/perl/geant4/geant4.9.3.p02/lib/Linux-g++/libG4intercoms.so 00462000-00463000 rw-p 00036000 fd:00 694723 /u/ey/perl/geant4/geant4.9.3.p02/lib/Linux-g++/libG4intercoms.so 00463000-00464000 rw-p 00000000 00:00 0 00466000-00478000 r-xp 00000000 fd:00 698451 /u/ey/perl/geant4/geant4.9.3.p02/lib/Linux-g++/libG4gl2ps.so 00478000-00479000 rw-p 00012000 fd:00 698451 /u/ey/perl/geant4/geant4.9.3.p02/lib/Linux-g++/libG4gl2ps.so 00479000-004ea000 r-xp 00000000 fd:00 695847 /u/ey/perl/geant4/geant4.9.3.p02/lib/Linux-g++/libG4digits_hits.so 004ea000-004ec000 rw-p 00071000 fd:00 695847 /u/ey/perl/geant4/geant4.9.3.p02/lib/Linux-g++/libG4digits_hits.so 004ec000-004ef000 rw-p 00000000 00:00 0 004ef000-004fc000 r-xp 00000000 fd:00 2767503 /usr/lib/libXi.so.6.1.0 004fc000-004fd000 rw-p 0000d000 fd:00 2767503 /usr/lib/libXi.so.6.1.0 004fd000-00500000 r-xp 00000000 fd:00 131245 /lib/libdl-2.12.1.so 00500000-00501000 r--p 00002000 fd:00 131245 /lib/libdl-2.12.1.so 00501000-00502000 rw-p 00003000 fd:00 131245 /lib/libdl-2.12.1.so 00502000-0050d000 r-xp 00000000 fd:00 3037291 /usr/lib/jvm/java-1.6.0-openjdk-1.6.0.0/jre/lib/i386/libverify.so 0050d000-0050e000 rw-p 0000b000 fd:00 3037291 /usr/lib/jvm/java-1.6.0-openjdk-1.6.0.0/jre/lib/i386/libverify.so 00512000-005c5000 r-xp 00000000 fd:00 695651 /u/ey/perl/geant4/geant4.9.3.p02/lib/Linux-g++/libG4particles.so 005c5000-005fd000 rw-p 000b2000 fd:00 695651 /u/ey/perl/geant4/geant4.9.3.p02/lib/Linux-g++/libG4particles.so 005fd000-005ff000 rw-p 00000000 00:00 0 005ff000-0062e000 r-xp 00000000 fd:00 694680 /u/ey/perl/geant4/geant4.9.3.p02/lib/Linux-g++/libG4global.so 0062e000-0062f000 rw-p 0002f000 fd:00 694680 /u/ey/perl/geant4/geant4.9.3.p02/lib/Linux-g++/libG4global.so 00634000-00708000 r-xp 00000000 fd:00 694833 /u/ey/perl/geant4/geant4.9.3.p02/lib/Linux-g++/libG4materials.so 00708000-00709000 rw-p 000d4000 fd:00 694833 /u/ey/perl/geant4/geant4.9.3.p02/lib/Linux-g++/libG4materials.so 00709000-0070b000 rw-p 00000000 00:00 0 0070b000-00722000 r-xp 00000000 fd:00 2766698 /usr/lib/libICE.so.6.3.0 00722000-00724000 rw-p 00016000 fd:00 2766698 /usr/lib/libICE.so.6.3.0 00724000-00725000 rw-p 00000000 00:00 0 00725000-00742000 r-xp 00000000 fd:00 131255 /lib/libgcc_s-4.4.4-20100503.so.1 00742000-00743000 rw-p 0001d000 fd:00 131255 /lib/libgcc_s-4.4.4-20100503.so.1 00743000-0075a000 r-xp 00000000 fd:00 131241 /lib/libpthread-2.12.1.so 0075a000-0075b000 r--p 00016000 fd:00 131241 /lib/libpthread-2.12.1.so 0075b000-0075c000 rw-p 00017000 fd:00 131241 /lib/libpthread-2.12.1.so 0075c000-0075e000 rw-p 00000000 00:00 0 0075e000-0077b000 r-xp 00000000 fd:00 2767249 /usr/lib/libxcb.so.1.1.0 0077b000-0077c000 rw-p 0001c000 fd:00 2767249 /usr/lib/libxcb.so.1.1.0 0077e000-00814000 r-xp 00000000 fd:00 698440 /u/ey/perl/geant4/geant4.9.3.p02/lib/Linux-g++/libG4persistency.so 00814000-00816000 rw-p 00095000 fd:00 698440 /u/ey/perl/geant4/geant4.9.3.p02/lib/Linux-g++/libG4persistency.so 00816000-00818000 rw-p 00000000 00:00 0 00818000-0081f000 r-xp 00000000 fd:00 169283 /lib/libcrypt-2.12.1.so 0081f000-00820000 r--p 00007000 fd:00 169283 /lib/libcrypt-2.12.1.so 00820000-00821000 rw-p 00008000 fd:00 169283 /lib/libcrypt-2.12.1.so 00821000-00848000 rw-p 00000000 00:00 0 00848000-0084e000 r-xp 00000000 fd:00 3037294 /usr/lib/jvm/java-1.6.0-openjdk-1.6.0.0/jre/lib/i386/native_threads/libhpi.so 0084e000-0084f000 rw-p 00006000 fd:00 3037294 /usr/lib/jvm/java-1.6.0-openjdk-1.6.0.0/jre/lib/i386/native_threads/libhpi.so 0084f000-00855000 r-xp 00000000 fd:00 3037292 /usr/lib/jvm/java-1.6.0-openjdk-1.6.0.0/jre/lib/i386/libzip.so 00855000-00856000 rw-p 00006000 fd:00 3037292 /usr/lib/jvm/java-1.6.0-openjdk-1.6.0.0/jre/lib/i386/libzip.so 00886000-008bb000 r-xp 00000000 fd:00 698434 /u/ey/perl/geant4/geant4.9.3.p02/lib/Linux-g++/libG4tracking.so 008bb000-008bc000 rw-p 00035000 fd:00 698434 /u/ey/perl/geant4/geant4.9.3.p02/lib/Linux-g++/libG4tracking.soAborted (core dumped)

thanks in advance,

Summit

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1 Note: Re: errors while installing Aida   (Ben Morgan - 16 Nov, 2010)
(_ Question: Re: errors while installing Aida   (Summit - 27 Nov, 2010)
(_ Idea: Re: errors while installing Aida   (Ben Morgan - 29 Nov, 2010)
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