Transport Matrices

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Dear Geant4 Users,

I had initially used a C program called raytrace to set up transport matrices and am working on changing it to a C++ program that will transport electrons to the Cerenkov target. To do this, I started with the Transport Matrix as follows:

void ExN02PrimaryGeneratorAction::InitializeTransportMatrix() {

  float T[6][6][6],R[6][6],in[6],outvec[6],Zo,z;

ifstream indata;
FILE *file;
char fname[50];
 int   using_x_direction,j,k,i,dum;
static int   set_up= FALSE,ray_number;

    for(i=0;i<6;i++)
       for(j=0;j<6;j++)
 outvec[i] = 0;         
 for(k=0;k<6;k++)
             T[i][j][k] = 0.0;
	for(i=0;i<5;i++)
       {
       for(j=0;j<6;j++)
          {
          for(k=0;k<=j;k++)

 fstream file("shms.dat");
	  if (!file){
	    cerr << "Failed to open file\n";
	    exit(EXIT_FAILURE);
	  }

    fscanf(file,"shms.dat",&dum,&dum,&(T[i][j][k]) );
          fscanf(file,"shms.dat");

          indata.open("shms.dat");
     fscanf(file,"shms.dat ",&(R[j][i]));

 outvec[i] += R[i][j]*in[j];
               for(k=0;k<6;k++)
                  outvec[i] += T[i][j][k]*in[j]*in[k];

       }
    fclose( file );

Now, I need to use the function  void ExN02PrimaryGeneratorAction::TransportTargetToCerenkov()
 {}

in order to transport the electrons to the Cerenkov mirrors/target and observe the photon pattersn created as a result. I was wondering had anything to add as far as how to set up a code that will transport the electrons after the transport matrix is initialized.

Thanks in Advance,