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Question Re: Problem during HadronTherapy simulation 

Forum: Medical Applications
Re: Question Problem during HadronTherapy simulation (Morad Hamad)
Re: Idea Re: Problem during HadronTherapy simulation (G.A.P.Cirrone)
Date: 17 Feb, 2010
From: Morad Hamad <Morad Hamad>

Dear Pablo,
Thank you a lot for fast replay.
I have already create a SimulationOutputs/proton/BraggPeak/ folder, but I can't find any new .root file and the problem still as it is.

when I make the example I get the following warning:


######################################
Compiling IAEAScoreWriter.cc ...
Compiling LocalINCLIonIonInelasticPhysic.cc ...
Compiling LocalIonIonInelasticPhysic.cc ...
Compiling PassiveProtonBeamLine.cc ...
Compiling PassiveProtonBeamLineMessenger.cc ...
Creating shared library /home/morad/geant4/tmp/Linux-g++/Hadrontherapy/libHadrontherapy.so ...
Compiling Hadrontherapy.cc ...
Using global libraries ...
Linking Hadrontherapy
/usr/lib/gcc/i586-suse-linux/4.1.2/../../../../i586-suse-linux/bin/ld: warning: libstdc++.so.5, needed by /data/geant/jaida/AIDAJNI-3.2.3/lib/Linux-g++/libAIDAJNI.so, may conflict with libstdc++.so.6
... Done!
morad@linux-tt1y:/data/geant/geant4.9.3/examples/advanced/hadrontherapy>
######################################

Is there any conflict? If not; how can I creat .root file?
NB the experemintal Bragg peak is very clear and i draw it

cheers,
Morad
On Tue, 16 Feb 2010 22:46:30 GMT, G.A.P.Cirrone wrote:
> On Tue, 16 Feb 2010 20:56:58 GMT, Morad Hamad wrote:
>
> > Dear Sir/Madam,
> > I am studying hadrontherapy simulation with geant4.9.3 which is
> > successfully installed. I would be appreciated if you kindly solve my
> > problem:
> >
> > when I try to simulate proton therapy using proton_therapy.mac the
> > following message appears:
> > ***********************************************
> > ---> Begin of Event: 4900
> > Run terminated.
> > Run Summary
> > Number of events processed : 5000
> > User=271.99s Real=272.28s Sys=0.26s
> > /control/shell mv DoseDistribution.root
> > SimulationOutputs/proton/BraggPeak/protonBraggPeak.root
> > mv: cannot stat `DoseDistribution.root': No such file or directory
> > Graphics systems deleted.
> > Visualization Manager deleting...
> > G4 kernel has come to Quit state.
> > ***********************************************
> > I can't make a comparison between experimental and simulate data (in
> > Bragg beak)
> > could you please help me to solve the problem?
> >
> > Cheers,
> > Morad Hamad,
> >
>
> Dear Morad, thank you for reporting this that I already saw and that
> will be fixed in the next Geant4 patch.
>
> The problem should be that the folder
> SimulationOutputs/proton/BraggPeak/ is not present in the hadrontherapy
> directory so that the program cannot move the file
> DoseDistribution.root. Please create this folder before to run the
> simulation. Once the directory is created and the file is automatically
> moved, you can go in the RootScript folder and run the 'conparison.C'
> script. Of course you can also move by hand the generated .root file.
>
> Hoping this will help your work, Pablo Cirrone
>

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1 Idea: Re: Problem during HadronTherapy simulation   (G.A.P.Cirrone - 17 Feb, 2010)
(_ None: Re: Problem during HadronTherapy simulation   (Morad Hamad - 21 Feb, 2010)
(_ None: Re: Problem during HadronTherapy simulation   (Ibrahim - 21 Feb, 2010)
(_ Ok: Re: Problem during HadronTherapy simulation   (Morad Hamad - 25 Feb, 2010)
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